Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Bstricta_Bostr.29223s0055 Bostr.29223s0055 |
Scaffold29223 | 337765 | 338403 | Phytozome | [[Species:|]]"Species:" cannot be used as a page name in this wiki. | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Bstricta_Bostr.29223s0055.1 Bostr.29223s0055.1 PAC:30676966 |
High | No | 538 | Get ORF Coding potential... Type: noncoding Potential: -0.911 Folding energies... MFEI: -21.059 AMFE: -0.550 GC content %: 38.290 | |
Bstricta_Bostr.29223s0055.2 Bostr.29223s0055.2 PAC:30676965 |
High | No | 531 | Get ORF Coding potential... Type: noncoding Potential: -0.909 Folding energies... MFEI: -20.734 AMFE: -0.542 GC content %: 38.230 |