Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Cclementina_Ciclev10002870m.g Ciclev10002870m.g |
scaffold_5 | 39412819 | 39414334 | Phytozome | v1.0 | Citrus_clementina | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Cclementina_Ciclev10002870m Ciclev10002870m PAC:20786083 |
Low | No | 653 | Get ORF Coding potential... Type: noncoding Potential: -0.477 Folding energies... MFEI: -24.717 AMFE: -0.578 GC content %: 42.726 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Cclementina_Ciclev10002870m | SwissProt | 2015-06-01 | Q9MAP5 | 8.0e-11 |