Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Cclementina_Ciclev10003400m.g Ciclev10003400m.g |
scaffold_5 | 10930096 | 10930422 | Phytozome | v1.0 | Citrus_clementina | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Cclementina_Ciclev10003400m Ciclev10003400m PAC:20787070 |
Low | No | 327 | Get ORF Coding potential... Type: noncoding Potential: -0.572 Folding energies... MFEI: -23.823 AMFE: -0.595 GC content %: 40.061 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Cclementina_Ciclev10003400m | SwissProt | 2015-06-01 | Q9SYY4 | 9.0e-8 |