Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Cclementina_Ciclev10017382m.g Ciclev10017382m.g |
scaffold_2 | 8950661 | 8953716 | Phytozome | v1.0 | Citrus_clementina | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Cclementina_Ciclev10017381m Ciclev10017381m PAC:20817491 |
Low | No | 463 | Get ORF Coding potential... Type: noncoding Potential: -0.017 Folding energies... MFEI: -21.404 AMFE: -0.590 GC content %: 36.285 | |
Cclementina_Ciclev10017382m Ciclev10017382m PAC:20817492 |
Low | No | 622 | Get ORF Coding potential... Type: noncoding Potential: -0.098 Folding energies... MFEI: -21.720 AMFE: -0.595 GC content %: 36.495 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Cclementina_Ciclev10017381m | SwissProt | 2015-06-01 | Q9FL96 | 7.0e-8 |
Cclementina_Ciclev10017382m | SwissProt | 2015-06-01 | Q9FL96 | 2.0e-7 |