Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Cclementina_Ciclev10017590m.g Ciclev10017590m.g |
scaffold_2 | 5000489 | 5001073 | Phytozome | v1.0 | Citrus_clementina | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Cclementina_Ciclev10017590m Ciclev10017590m PAC:20818980 |
Low | No | 585 | Get ORF Coding potential... Type: noncoding Potential: -0.545 Folding energies... MFEI: -24.684 AMFE: -0.625 GC content %: 39.487 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Cclementina_Ciclev10017590m | SwissProt | 2015-06-01 | Q9SD53 | 5.0e-7 |