Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Cgrandiflora_Cagra.0635s0027 Cagra.0635s0027 |
Scaffold635 | 107939 | 108441 | Phytozome | v1.1 | Capsella_grandiflora | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Cgrandiflora_Cagra.0635s0027.1 Cagra.0635s0027.1 PAC:28908381 |
High | No | 332 | Get ORF Coding potential... Type: noncoding Potential: -1.185 Folding energies... MFEI: -18.163 AMFE: -0.515 GC content %: 35.241 | |
Cgrandiflora_Cagra.0635s0027.2 Cagra.0635s0027.2 PAC:28908382 |
High | No | 329 | Get ORF Coding potential... Type: noncoding Potential: -1.184 Folding energies... MFEI: -18.815 AMFE: -0.534 GC content %: 35.258 |