Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Cpapaya_evm.TU.supercontig_43.139 evm.TU.supercontig_43.139 |
supercontig_43 | 1712000 | 1712393 | Phytozome | ASGPBv0.4 | Carica_papaya | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Cpapaya_evm.model.supercontig_43.139 evm.model.supercontig_43.139 PAC:16419950 |
High | No | 285 | Get ORF Coding potential... Type: noncoding Potential: -0.493 Folding energies... MFEI: -25.193 AMFE: -0.574 GC content %: 43.860 |