Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Creinhardtii_Cre09.g402219 Cre09.g402219 |
chromosome_9 | 5832519 | 5834176 | Phytozome | v5.5 | Chlamydomonas_reinhardtii | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Creinhardtii_Cre09.g402219.t1.1 Cre09.g402219.t1.1 PAC:30781519 |
High | No | 648 | Get ORF Coding potential... Type: noncoding Potential: -0.420 Folding energies... MFEI: -38.642 AMFE: -0.670 GC content %: 57.716 | |
Creinhardtii_Cre09.g402219.t2.1 Cre09.g402219.t2.1 PAC:30781520 |
High | No | 860 | Get ORF Coding potential... Type: noncoding Potential: -0.485 Folding energies... MFEI: -36.791 AMFE: -0.648 GC content %: 56.744 |