Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Crubella_Carubv10002282m.g Carubv10002282m.g |
scaffold_6 | 4981939 | 4982695 | Phytozome | v1.0 | Capsella_rubella | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Crubella_Carubv10002281m Carubv10002281m PAC:20910898 |
High | No | 469 | Get ORF Coding potential... Type: noncoding Potential: -0.686 Folding energies... MFEI: -27.676 AMFE: -0.587 GC content %: 47.122 | |
Crubella_Carubv10002282m Carubv10002282m PAC:20910899 |
High | No | 513 | Get ORF Coding potential... Type: noncoding Potential: -0.706 Folding energies... MFEI: -26.101 AMFE: -0.592 GC content %: 44.055 |