Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Crubella_Carubv10002306m.g Carubv10002306m.g |
scaffold_6 | 9861756 | 9863135 | Phytozome | v1.0 | Capsella_rubella | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Crubella_Carubv10002306m Carubv10002306m PAC:20910882 |
High | No | 678 | Get ORF Coding potential... Type: noncoding Potential: -0.934 Folding energies... MFEI: -26.711 AMFE: -0.651 GC content %: 41.003 | |
Crubella_Carubv10002374m Carubv10002374m PAC:20910883 |
High | No | 773 | Get ORF Coding potential... Type: noncoding Potential: -0.939 Folding energies... MFEI: -28.085 AMFE: -0.712 GC content %: 39.457 |