Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Crubella_Carubv10002317m.g Carubv10002317m.g |
scaffold_6 | 1889929 | 1892488 | Phytozome | v1.0 | Capsella_rubella | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Crubella_Carubv10002317m Carubv10002317m PAC:20909635 |
High | No | 984 | Get ORF Coding potential... Type: noncoding Potential: -0.477 Folding energies... MFEI: -22.530 AMFE: -0.626 GC content %: 35.976 | |
Crubella_Carubv10002318m Carubv10002318m PAC:20909636 |
High | No | 967 | Get ORF Coding potential... Type: noncoding Potential: -0.483 Folding energies... MFEI: -22.544 AMFE: -0.625 GC content %: 36.091 |