Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Crubella_Carubv10002331m.g Carubv10002331m.g |
scaffold_6 | 16344343 | 16346054 | Phytozome | v1.0 | Capsella_rubella | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Crubella_Carubv10002351m Carubv10002351m PAC:20908318 |
Low | No | 788 | Get ORF Coding potential... Type: noncoding Potential: -0.941 Folding energies... MFEI: -19.365 AMFE: -0.523 GC content %: 37.056 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Crubella_Carubv10002351m | SwissProt | 2015-06-01 | Q570Y6 | 1.0e-56 |