Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Crubella_Carubv10010680m.g Carubv10010680m.g |
scaffold_1 | 6862520 | 6863005 | Phytozome | v1.0 | Capsella_rubella | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Crubella_Carubv10010680m Carubv10010680m PAC:20891723 |
Low | No | 486 | Get ORF Coding potential... Type: noncoding Potential: -0.671 Folding energies... MFEI: -25.000 AMFE: -0.614 GC content %: 40.741 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Crubella_Carubv10010680m | SwissProt | 2015-06-01 | P32295 | 1.0e-9 |