Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Crubella_Carubv10010756m.g Carubv10010756m.g |
scaffold_1 | 5600819 | 5602016 | Phytozome | v1.0 | Capsella_rubella | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Crubella_Carubv10010756m Carubv10010756m PAC:20890649 |
High | No | 730 | Get ORF Coding potential... Type: noncoding Potential: -1.007 Folding energies... MFEI: -26.548 AMFE: -0.625 GC content %: 42.466 | |
Crubella_Carubv10010759m Carubv10010759m PAC:20890650 |
High | No | 506 | Get ORF Coding potential... Type: noncoding Potential: -0.904 Folding energies... MFEI: -24.150 AMFE: -0.614 GC content %: 39.328 |