Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Crubella_Carubv10012562m.g Carubv10012562m.g |
scaffold_1 | 14551811 | 14552074 | Phytozome | v1.0 | Capsella_rubella | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Crubella_Carubv10012562m Carubv10012562m PAC:20889378 |
Low | No | 264 | Get ORF Coding potential... Type: noncoding Potential: -0.795 Folding energies... MFEI: -25.985 AMFE: -0.497 GC content %: 52.273 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Crubella_Carubv10012562m | RepBase (RepeatMasker) | 2014-01-31 | ATCopia77_I-int |