Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Crubella_Carubv10016499m.g Carubv10016499m.g |
scaffold_3 | 11921228 | 11922108 | Phytozome | v1.0 | Capsella_rubella | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Crubella_Carubv10016499m Carubv10016499m PAC:20898491 |
Low | No | 881 | Get ORF Coding potential... Type: noncoding Potential: -1.174 Folding energies... MFEI: -18.491 AMFE: -0.574 GC content %: 32.236 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Crubella_Carubv10016499m | RepBase (RepeatMasker) | 2014-01-31 | ATMUNX1 |