Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Crubella_Carubv10024376m.g Carubv10024376m.g |
scaffold_4 | 5757097 | 5758549 | Phytozome | v1.0 | Capsella_rubella | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Crubella_Carubv10024375m Carubv10024375m PAC:20902860 |
High | No | 950 | Get ORF Coding potential... Type: noncoding Potential: -1.046 Folding energies... MFEI: -27.326 AMFE: -0.669 GC content %: 40.842 | |
Crubella_Carubv10024376m Carubv10024376m PAC:20902859 |
High | No | 803 | Get ORF Coding potential... Type: noncoding Potential: -1.026 Folding energies... MFEI: -28.319 AMFE: -0.679 GC content %: 41.719 |