Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Csinensis_orange1.1g034327m.g orange1.1g034327m.g |
scaffold00725 | 55920 | 57301 | Phytozome | v1.1 | Citrus_sinensis | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Csinensis_orange1.1g034327m orange1.1g034327m PAC:18134334 |
High | No | 528 | Get ORF Coding potential... Type: noncoding Potential: -0.828 Folding energies... MFEI: -26.610 AMFE: -0.603 GC content %: 44.129 | |
Csinensis_orange1.1g034684m orange1.1g034684m PAC:18134335 |
High | No | 903 | Get ORF Coding potential... Type: noncoding Potential: -1.043 Folding energies... MFEI: -26.091 AMFE: -0.669 GC content %: 38.981 |