Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Csinensis_orange1.1g034334m.g orange1.1g034334m.g |
scaffold00001 | 2979225 | 2983741 | Phytozome | v1.1 | Citrus_sinensis | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Csinensis_orange1.1g034334m orange1.1g034334m PAC:18137564 |
High | No | 862 | Get ORF Coding potential... Type: noncoding Potential: -0.465 Folding energies... MFEI: -28.213 AMFE: -0.647 GC content %: 43.619 | |
Csinensis_orange1.1g034349m orange1.1g034349m PAC:18137565 |
High | No | 765 | Get ORF Coding potential... Type: noncoding Potential: -0.434 Folding energies... MFEI: -25.216 AMFE: -0.647 GC content %: 38.954 |