Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Csinensis_orange1.1g034484m.g orange1.1g034484m.g |
scaffold00001 | 4494527 | 4495863 | Phytozome | v1.1 | Citrus_sinensis | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Csinensis_orange1.1g034484m orange1.1g034484m PAC:18136985 |
High | No | 459 | Get ORF Coding potential... Type: noncoding Potential: -0.518 Folding energies... MFEI: -20.654 AMFE: -0.499 GC content %: 41.394 | |
Csinensis_orange1.1g034495m orange1.1g034495m PAC:18136986 |
High | No | 600 | Get ORF Coding potential... Type: noncoding Potential: -0.596 Folding energies... MFEI: -20.467 AMFE: -0.534 GC content %: 38.333 |