Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Csinensis_orange1.1g036060m.g orange1.1g036060m.g |
scaffold00258 | 132554 | 133009 | Phytozome | v1.1 | Citrus_sinensis | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Csinensis_orange1.1g036060m orange1.1g036060m PAC:18116981 |
Low | No | 351 | Get ORF Coding potential... Type: noncoding Potential: -0.424 Folding energies... MFEI: -27.749 AMFE: -0.609 GC content %: 45.584 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Csinensis_orange1.1g036060m | SwissProt | 2015-06-01 | A8MRP4 | 1.0e-10 |