Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Csinensis_orange1.1g036084m.g orange1.1g036084m.g |
scaffold00138 | 22350 | 22762 | Phytozome | v1.1 | Citrus_sinensis | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Csinensis_orange1.1g036084m orange1.1g036084m PAC:18100776 |
Low | No | 381 | Get ORF Coding potential... Type: noncoding Potential: -0.701 Folding energies... MFEI: -26.404 AMFE: -0.562 GC content %: 46.982 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Csinensis_orange1.1g036084m | SwissProt | 2015-06-01 | Q7Z7K6 | 3.0e-19 |