Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Csinensis_orange1.1g036838m.g orange1.1g036838m.g |
scaffold00007 | 750791 | 751261 | Phytozome | v1.1 | Citrus_sinensis | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Csinensis_orange1.1g036838m orange1.1g036838m PAC:18112691 |
Low | No | 312 | Get ORF Coding potential... Type: noncoding Potential: -0.051 Folding energies... MFEI: -24.519 AMFE: -0.543 GC content %: 45.192 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Csinensis_orange1.1g036838m | SwissProt | 2015-06-01 | Q9LXT4 | 4.0e-17 |