Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Csinensis_orange1.1g038334m.g orange1.1g038334m.g |
scaffold08169 | 921 | 1193 | Phytozome | v1.1 | Citrus_sinensis | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Csinensis_orange1.1g038334m orange1.1g038334m PAC:18132015 |
Low | No | 273 | Get ORF Coding potential... Type: noncoding Potential: -0.820 Folding energies... MFEI: -23.516 AMFE: -0.578 GC content %: 40.659 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Csinensis_orange1.1g038334m | SwissProt | 2015-06-01 | Q9P6Q3 | 9.0e-5 |