Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Csinensis_orange1.1g039550m.g orange1.1g039550m.g |
scaffold00138 | 145925 | 146215 | Phytozome | v1.1 | Citrus_sinensis | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Csinensis_orange1.1g039550m orange1.1g039550m PAC:18100820 |
Low | No | 291 | Get ORF Coding potential... Type: noncoding Potential: -0.420 Folding energies... MFEI: -21.993 AMFE: -0.552 GC content %: 39.863 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Csinensis_orange1.1g039550m | RepBase (RepeatMasker) | 2014-01-31 | CRM_INT-int |