Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Csinensis_orange1.1g045980m.g orange1.1g045980m.g |
scaffold09634 | 227 | 790 | Phytozome | v1.1 | Citrus_sinensis | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Csinensis_orange1.1g045980m orange1.1g045980m PAC:18093884 |
Low | No | 378 | Get ORF Coding potential... Type: noncoding Potential: -0.920 Folding energies... MFEI: -31.958 AMFE: -0.626 GC content %: 51.058 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Csinensis_orange1.1g045980m | SwissProt | 2015-06-01 | P64742 | 2.0e-8 |