Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Csinensis_orange1.1g047102m.g orange1.1g047102m.g |
scaffold00011 | 483700 | 484937 | Phytozome | v1.1 | Citrus_sinensis | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Csinensis_orange1.1g047102m orange1.1g047102m PAC:18106228 |
Low | No | 282 | Get ORF Coding potential... Type: noncoding Potential: -0.191 Folding energies... MFEI: -29.184 AMFE: -0.653 GC content %: 44.681 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Csinensis_orange1.1g047102m | SwissProt | 2015-06-01 | Q969E8 | 4.0e-10 |