Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
CsubellipsoideaC169_Genemark1.1770_g CsubellipsoideaC169_Genemark1.1770_g |
scaffold_3 | 1702179 | 1703261 | Phytozome | v2.0 | Coccomyxa_subellipsoidea_C-169 | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
CsubellipsoideaC169_60959 CsubellipsoideaC169_60959 PAC:27390721 |
Low | Yes | 291 | Get ORF Coding potential... Type: noncoding Potential: -0.691 Folding energies... MFEI: -37.251 AMFE: -0.580 GC content %: 64.261 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
CsubellipsoideaC169_60959 | RepBase (RepeatMasker) | 2014-01-31 | ZEPP |