Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
CsubellipsoideaC169_Genemark1.2961_g CsubellipsoideaC169_Genemark1.2961_g |
scaffold_5 | 1925358 | 1925721 | Phytozome | v2.0 | Coccomyxa_subellipsoidea_C-169 | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
CsubellipsoideaC169_62178 CsubellipsoideaC169_62178 PAC:27387413 |
Low | No | 243 | Get ORF Coding potential... Type: noncoding Potential: -0.490 Folding energies... MFEI: -40.329 AMFE: -0.681 GC content %: 59.259 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
CsubellipsoideaC169_62178 | SwissProt | 2015-06-01 | Q9ASU1 | 5.0e-6 |