Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
CsubellipsoideaC169_Genemark1.3562_g CsubellipsoideaC169_Genemark1.3562_g |
scaffold_6 | 2106720 | 2107715 | Phytozome | v2.0 | Coccomyxa_subellipsoidea_C-169 | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
CsubellipsoideaC169_62779 CsubellipsoideaC169_62779 PAC:27391272 |
Low | Yes | 357 | Get ORF Coding potential... Type: noncoding Potential: -0.909 Folding energies... MFEI: -41.933 AMFE: -0.634 GC content %: 66.106 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
CsubellipsoideaC169_62779 | RepBase (RepeatMasker) | 2014-01-31 | ZEPP |