Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
CsubellipsoideaC169_Genemark1.5462_g CsubellipsoideaC169_Genemark1.5462_g |
scaffold_11 | 1367371 | 1367813 | Phytozome | v2.0 | Coccomyxa_subellipsoidea_C-169 | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
CsubellipsoideaC169_56433 CsubellipsoideaC169_56433 PAC:27392091 |
Low | No | 234 | Get ORF Coding potential... Type: noncoding Potential: -0.458 Folding energies... MFEI: -34.530 AMFE: -0.646 GC content %: 53.419 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
CsubellipsoideaC169_56433 | SwissProt | 2015-06-01 | Q03606 | 2.0e-7 |