Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
CsubellipsoideaC169_Genemark1.6350_g CsubellipsoideaC169_Genemark1.6350_g |
scaffold_14 | 699652 | 700060 | Phytozome | v2.0 | Coccomyxa_subellipsoidea_C-169 | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
CsubellipsoideaC169_57321 CsubellipsoideaC169_57321 PAC:27387873 |
Low | No | 297 | Get ORF Coding potential... Type: noncoding Potential: -0.417 Folding energies... MFEI: -35.926 AMFE: -0.620 GC content %: 57.912 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
CsubellipsoideaC169_57321 | SwissProt | 2015-06-01 | Q5D016 | 5.0e-6 |