Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
CsubellipsoideaC169_Genemark1.8770_g CsubellipsoideaC169_Genemark1.8770_g |
scaffold_25 | 404633 | 404989 | Phytozome | v2.0 | Coccomyxa_subellipsoidea_C-169 | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
CsubellipsoideaC169_60454 CsubellipsoideaC169_60454 PAC:27394088 |
Low | Yes | 357 | Get ORF Coding potential... Type: noncoding Potential: -0.163 Folding energies... MFEI: -37.423 AMFE: -0.639 GC content %: 58.543 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
CsubellipsoideaC169_60454 | Rfam | 11.0 | MIR444 | 0.0073 |