Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
CsubellipsoideaC169_Genemark1.8877_g CsubellipsoideaC169_Genemark1.8877_g |
scaffold_26 | 441723 | 443000 | Phytozome | v2.0 | Coccomyxa_subellipsoidea_C-169 | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
CsubellipsoideaC169_60561 CsubellipsoideaC169_60561 PAC:27388140 |
Low | Yes | 258 | Get ORF Coding potential... Type: noncoding Potential: -0.959 Folding energies... MFEI: -48.643 AMFE: -0.690 GC content %: 70.543 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
CsubellipsoideaC169_60561 | RepBase (RepeatMasker) | 2014-01-31 | ZEPP |