Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
CsubellipsoideaC169_estExt_Genemark1.C_20142 CsubellipsoideaC169_estExt_Genemark1.C_20142 |
scaffold_2 | 891653 | 892880 | Phytozome | v2.0 | Coccomyxa_subellipsoidea_C-169 | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
CsubellipsoideaC169_64470 CsubellipsoideaC169_64470 PAC:27393472 |
Low | No | 837 | Get ORF Coding potential... Type: noncoding Potential: -0.317 Folding energies... MFEI: -32.545 AMFE: -0.621 GC content %: 52.449 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
CsubellipsoideaC169_64470 | SwissProt | 2015-06-01 | Q5R9E5 | 7.0e-9 |