Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
CsubellipsoideaC169_estExt_Genemark1.C_20395 CsubellipsoideaC169_estExt_Genemark1.C_20395 |
scaffold_2 | 2107445 | 2108400 | Phytozome | v2.0 | Coccomyxa_subellipsoidea_C-169 | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
CsubellipsoideaC169_64596 CsubellipsoideaC169_64596 PAC:27393453 |
Low | No | 752 | Get ORF Coding potential... Type: noncoding Potential: -0.510 Folding energies... MFEI: -32.606 AMFE: -0.630 GC content %: 51.729 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
CsubellipsoideaC169_64596 | SwissProt | 2015-06-01 | Q42496 | 6.0e-9 |