Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
CsubellipsoideaC169_estExt_Genewise1.C_210045 CsubellipsoideaC169_estExt_Genewise1.C_210045 |
scaffold_21 | 382298 | 383341 | Phytozome | v2.0 | Coccomyxa_subellipsoidea_C-169 | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
CsubellipsoideaC169_26086 CsubellipsoideaC169_26086 PAC:27395081 |
Low | No | 581 | Get ORF Coding potential... Type: noncoding Potential: -1.132 Folding energies... MFEI: -32.599 AMFE: -0.644 GC content %: 50.602 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
CsubellipsoideaC169_26086 | SwissProt | 2015-06-01 | Q4V7T9 | 7.0e-6 |