Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
CsubellipsoideaC169_estExt_fgenesh1_pm.C_40237 CsubellipsoideaC169_estExt_fgenesh1_pm.C_40237 |
scaffold_4 | 2555902 | 2556517 | Phytozome | v2.0 | Coccomyxa_subellipsoidea_C-169 | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
CsubellipsoideaC169_52894 CsubellipsoideaC169_52894 PAC:27390205 |
Low | No | 511 | Get ORF Coding potential... Type: noncoding Potential: -1.031 Folding energies... MFEI: -32.211 AMFE: -0.664 GC content %: 48.532 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
CsubellipsoideaC169_52894 | SwissProt | 2015-06-01 | O82067 | 3.0e-5 |