Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
CsubellipsoideaC169_gw1.8.436.1 CsubellipsoideaC169_gw1.8.436.1 |
scaffold_8 | 1310207 | 1310890 | Phytozome | v2.0 | Coccomyxa_subellipsoidea_C-169 | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
CsubellipsoideaC169_9606 CsubellipsoideaC169_9606 PAC:27392525 |
Low | No | 309 | Get ORF Coding potential... Type: noncoding Potential: -0.604 Folding energies... MFEI: -33.139 AMFE: -0.610 GC content %: 54.369 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
CsubellipsoideaC169_9606 | SwissProt | 2015-06-01 | Q9FY89 | 2.0e-11 |