Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Egrandis_Eucgr.E00765 Eucgr.E00765 |
Chr05 | 7855531 | 7863637 | Phytozome | v2.0 | Eucalyptus_grandis | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Egrandis_Eucgr.E00765.1 Eucgr.E00765.1 PAC:32029458 |
High | No | 609 | Get ORF Coding potential... Type: noncoding Potential: -0.531 Folding energies... MFEI: -23.350 AMFE: -0.588 GC content %: 39.737 | |
Egrandis_Eucgr.E00765.2 Eucgr.E00765.2 PAC:32029459 |
High | No | 649 | Get ORF Coding potential... Type: noncoding Potential: -0.572 Folding energies... MFEI: -24.638 AMFE: -0.615 GC content %: 40.062 | |
Egrandis_Eucgr.E00765.3 Eucgr.E00765.3 PAC:32029460 |
High | No | 652 | Get ORF Coding potential... Type: noncoding Potential: -0.545 Folding energies... MFEI: -24.371 AMFE: -0.609 GC content %: 40.031 |