Gene

Egrandis Eucgr.J01938

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Egrandis_Eucgr.J01938
Eucgr.J01938
Chr10 24786174 24786380 Phytozome v2.0 Eucalyptus_grandis
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Egrandis_Eucgr.J01938.1
Eucgr.J01938.1
PAC:32035035
High No 207
Coding potential...
Type: noncoding Potential: -1.174
Folding energies...
MFEI: -25.845 AMFE: -0.505
GC content
%: 51.208


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Eucgr.J01938.png