Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Egrandis_Eucgr.K02602 Eucgr.K02602 |
Chr11 | 26059896 | 26064776 | Phytozome | v2.0 | Eucalyptus_grandis | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Egrandis_Eucgr.K02602.1 Eucgr.K02602.1 PAC:32067835 |
High | No | 1456 | Get ORF Coding potential... Type: noncoding Potential: -0.608 Folding energies... MFEI: -27.967 AMFE: -0.631 GC content %: 44.299 | |
Egrandis_Eucgr.K02602.2 Eucgr.K02602.2 PAC:32067836 |
High | No | 863 | Get ORF Coding potential... Type: noncoding Potential: -0.491 Folding energies... MFEI: -27.312 AMFE: -0.601 GC content %: 45.423 | |
Egrandis_Eucgr.K02602.3 Eucgr.K02602.3 PAC:32067837 |
High | No | 870 | Get ORF Coding potential... Type: noncoding Potential: -0.493 Folding energies... MFEI: -27.046 AMFE: -0.599 GC content %: 45.172 |