Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Egrandis_Eucgr.L03301 Eucgr.L03301 |
scaffold_2607 | 2933 | 6490 | Phytozome | v2.0 | Eucalyptus_grandis | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Egrandis_Eucgr.L03301.1 Eucgr.L03301.1 PAC:32040575 |
High | No | 693 | Get ORF Coding potential... Type: noncoding Potential: -0.742 Folding energies... MFEI: -25.411 AMFE: -0.633 GC content %: 40.115 | |
Egrandis_Eucgr.L03301.2 Eucgr.L03301.2 PAC:32040576 |
High | No | 786 | Get ORF Coding potential... Type: noncoding Potential: -0.757 Folding energies... MFEI: -25.496 AMFE: -0.638 GC content %: 39.949 |