Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Esalsugineum_Thhalv10000645m.g Thhalv10000645m.g |
scaffold_15 | 1885857 | 1886768 | Phytozome | v1.0 | Eutrema_salsugineum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Esalsugineum_Thhalv10000645m Thhalv10000645m PAC:20208571 |
Low | No | 222 | Get ORF Coding potential... Type: noncoding Potential: -0.598 Folding energies... MFEI: -24.730 AMFE: -0.544 GC content %: 45.495 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Esalsugineum_Thhalv10000645m | SwissProt | 2015-06-01 | Q9LYD9 | 4.0e-4 |