Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Esalsugineum_Thhalv10002124m.g Thhalv10002124m.g |
scaffold_12 | 10690331 | 10691765 | Phytozome | v1.0 | Eutrema_salsugineum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Esalsugineum_Thhalv10002123m Thhalv10002123m PAC:20200418 |
High | No | 1161 | Get ORF Coding potential... Type: noncoding Potential: -0.367 Folding energies... MFEI: -24.297 AMFE: -0.604 GC content %: 40.224 | |
Esalsugineum_Thhalv10002124m Thhalv10002124m PAC:20200417 |
High | No | 1220 | Get ORF Coding potential... Type: noncoding Potential: -0.448 Folding energies... MFEI: -24.180 AMFE: -0.600 GC content %: 40.328 |