Gene

Esalsugineum Thhalv10009278m.g

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Esalsugineum_Thhalv10009278m.g
Thhalv10009278m.g
scaffold_5 14751255 14751512 Phytozome v1.0 Eutrema_salsugineum
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Esalsugineum_Thhalv10009278m
Thhalv10009278m
PAC:20187843
High No 258
Coding potential...
Type: noncoding Potential: -0.718
Folding energies...
MFEI: -21.667 AMFE: -0.559
GC content
%: 38.760


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Thhalv10009278m.g.png