Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Esalsugineum_Thhalv10019393m.g Thhalv10019393m.g |
scaffold_9 | 1099819 | 1101074 | Phytozome | v1.0 | Eutrema_salsugineum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Esalsugineum_Thhalv10019392m Thhalv10019392m PAC:20191956 |
High | No | 528 | Get ORF Coding potential... Type: noncoding Potential: -1.289 Folding energies... MFEI: -25.133 AMFE: -0.650 GC content %: 38.636 | |
Esalsugineum_Thhalv10019393m Thhalv10019393m PAC:20191955 |
High | No | 539 | Get ORF Coding potential... Type: noncoding Potential: -1.292 Folding energies... MFEI: -25.788 AMFE: -0.668 GC content %: 38.590 |