Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Esalsugineum_Thhalv10022955m.g Thhalv10022955m.g |
scaffold_11 | 713623 | 715146 | Phytozome | v1.0 | Eutrema_salsugineum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Esalsugineum_Thhalv10022955m Thhalv10022955m PAC:20202392 |
High | No | 1179 | Get ORF Coding potential... Type: noncoding Potential: -1.240 Folding energies... MFEI: -26.285 AMFE: -0.665 GC content %: 39.525 | |
Esalsugineum_Thhalv10022956m Thhalv10022956m PAC:20202393 |
High | No | 1402 | Get ORF Coding potential... Type: noncoding Potential: -1.294 Folding energies... MFEI: -25.014 AMFE: -0.676 GC content %: 37.019 |