Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Fvesca_gene00565-v1.0-hybrid gene00565-v1.0-hybrid |
LG6 | 19891454 | 19892476 | Phytozome | v1.1 | Fragaria_vesca | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Fvesca_mrna00565.1-v1.0-hybrid mrna00565.1-v1.0-hybrid PAC:27258919 |
Low | No | 312 | Get ORF Coding potential... Type: noncoding Potential: -0.698 Folding energies... MFEI: -43.045 AMFE: -0.759 GC content %: 56.731 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Fvesca_mrna00565.1-v1.0-hybrid | SwissProt | 2015-06-01 | P08770 | 2.0e-7 |
Fvesca_mrna00565.1-v1.0-hybrid | RepBase (RepeatMasker) | 2014-01-31 | hAT-N1_FV |