Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Fvesca_gene04891-v1.0-hybrid gene04891-v1.0-hybrid |
LG7 | 10785864 | 10786413 | Phytozome | v1.1 | Fragaria_vesca | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Fvesca_mrna04891.1-v1.0-hybrid mrna04891.1-v1.0-hybrid PAC:27249415 |
Low | Yes | 327 | Get ORF Coding potential... Type: noncoding Potential: -0.705 Folding energies... MFEI: -85.994 AMFE: -1.472 GC content %: 58.410 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Fvesca_mrna04891.1-v1.0-hybrid | Rfam | 11.0 | mir-357 | 7.7e-7 |
Fvesca_mrna04891.1-v1.0-hybrid | RepBase (RepeatMasker) | 2014-01-31 | DNA-2_FV |